Breakfast Egg Muffins (Healthy Meal Prep Breakfast)

Looking for a quick, healthy breakfast you can grab and go? These Breakfast Egg Muffins are fluffy, savory, and packed with colorful vegetables and creamy feta cheese. Baked in a muffin tin, they’re perfect for meal prep, busy mornings, or high-protein snacks.

Make a batch on Sunday and enjoy easy breakfasts all week long. Just reheat and go!

table of contents

Recipe Overview

  • Prep Time: 15 minutes
  • Cook Time: 25 minutes
  • Total Time: 40 minutes
  • Servings: 12 egg muffins
  • Cuisine: American / Healthy Breakfast

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Ingredients

  • Extra-virgin olive oil (for greasing the pan)
  • 2 cups diced red bell pepper (about 2 medium)
  • ½ cup chopped scallions
  • 9 large eggs
  • 1 garlic clove, grated
  • ½ teaspoon sea salt
  • Freshly ground black pepper
  • 3 tablespoons all-purpose flour
  • ¾ teaspoon baking powder
  • ⅓ cup crumbled feta cheese

Instructions

1️⃣ Preheat Oven

Preheat oven to 350°F (175°C).

Grease a 12-cup muffin tin with olive oil.

2️⃣ Add Vegetables

Divide diced bell peppers and scallions evenly among muffin cups

3️⃣ Mix Egg Batter

In a large bowl, whisk together:

  • Eggs
  • Garlic
  • Salt
  • Black pepper

Sprinkle in flour and baking powder. Whisk until combined.

A few flour clumps are okay.

4️⃣ Fill Muffin Cups

Pour egg mixture into muffin cups (about ¼ cup each).

Sprinkle feta cheese on top.

5️⃣ Bake

Bake 22–24 minutes, until eggs are fully set.

Let cool slightly before removing from the pan.

Meal Prep & Storage Tips

Refrigerator

Store in airtight container up to 4 days.

Freezer

Freeze for up to 2 months.

Reheating

  • Microwave: 30–40 seconds
  • Oven: 350°F for 10 minutes
  • Air fryer: 320°F for 5 minutes

Flavor Variations

Try these delicious add-ins:

  • Spinach + goat cheese
  • Bacon + cheddar
  • Mushroom + Swiss
  • Broccoli + mozzarella
  • Turkey sausage + peppers

Nutrition (Per Muffin Approx.)

  • Calories: 95 kcal
  • Protein: 7g
  • Fat: 6g
  • Carbohydrates: 3g

Nutrition may vary based on ingredients.

FAQs

Why did my egg muffins deflate?

Egg muffins naturally deflate slightly after baking.

Can I make them dairy-free?

Yes. Simply omit the feta cheese.

Can I make them gluten-free?

Use almond flour or a gluten-free flour blend.

Disclaimer

Nutrition values are estimates and may vary depending on ingredient brands and portion sizes.

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Breakfast Egg Muffins

Healthy baked egg muffins loaded with diced bell peppers, scallions, and tangy feta cheese. These protein-packed muffins are perfect for meal prep or quick grab-and-go breakfasts.
Prep Time 10 minutes
Cook Time 24 minutes
Total Time 34 minutes
Servings: 9 egg muffins
Course: Breakfast
Cuisine: American
Calories: 160

Ingredients
  

  • 9 eggs
  • 2 cups red bell pepper, diced
  • 1/2 cup scallions, chopped
  • 1 clove garlic, minced
  • 3 tbsp all-purpose flour
  • 3/4 tsp baking powder
  • 1/3 cup feta cheese, crumbled
  • salt, to taste
  • black pepper, to taste

Equipment

  • muffin tin
  • mixing bowl
  • Whisk
  • measuring cups
  • Knife and cutting board

Method
 

  1. Preheat oven to 350°F (175°C) and lightly grease a muffin tin.
  2. Divide diced bell peppers and scallions evenly among the muffin cups.
  3. In a bowl, whisk together eggs, minced garlic, salt, pepper, flour, and baking powder until smooth.
  4. Pour the egg mixture evenly into the muffin cups over the vegetables.
  5. Sprinkle crumbled feta cheese on top of each muffin.
  6. Bake for 22–24 minutes until eggs are set and lightly golden. Cool slightly before removing from the pan.

Nutrition

Calories: 160kcalCarbohydrates: 6gProtein: 10gFat: 10gSaturated Fat: 4gPolyunsaturated Fat: 1gMonounsaturated Fat: 4gCholesterol: 190mgSodium: 320mgPotassium: 210mgFiber: 1gSugar: 2gVitamin A: 1400IUVitamin C: 60mgCalcium: 120mgIron: 1.5mg

Notes

Lightly grease the muffin tin to prevent sticking. These egg muffins store well in the refrigerator for up to 4 days and can be reheated in the microwave. Nutrition values are estimates.

Tried this recipe?

Let us know how it was!

Conclusion

These Breakfast Egg Muffins are the perfect combination of healthy, convenient, and delicious. Packed with protein and colorful vegetables, they make mornings easier and keep you energized throughout the day.

Make them once, and they’ll quickly become your favorite meal prep breakfast.